PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035305.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 139aa    MW: 15697 Da    PI: 7.7667
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035305.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.58.5e-1239122179
                            EEEE-..-HHHHT.T-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-E CS
                     B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDf 79 
                            f+k  + sd++ + +rlv+pk++a+++     +    +++ + + d +g++We  +     +++s++yvlt G +eF  +++L+ gD+
  Cse_sc035305.1_g010.1  39 FEKLASASDANLRiSRLVIPKDYAKAYfpavsD---YQKIPVNIVDADGKEWEDIYFRcypCRYSKTYVLT-GLREFIISKHLQKGDT 122
                            666666677665569*************97643...355679999*******977633458**********.***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
CCTAGLDHLP ERSLKDSCVS EQRTAGTRLC PNAVRIPLFE KLASASDANL RISRLVIPKD  60
YAKAYFPAVS DYQKIPVNIV DADGKEWEDI YFRCYPCRYS KTYVLTGLRE FIISKHLQKG  120
DTGINLMMWE IADVSTKDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.16e-21B3 family protein