PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035409.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 290aa    MW: 32548.9 Da    PI: 7.5027
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035409.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.73.6e-151462148
                           TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                           rg+W +eEd++lv+++++ Gg+ +W++ ++  g+ R++k+c++rw +yl
  Cse_sc035409.1_g010.1 14 RGPWAPEEDDILVNYINKNGGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62
                           89*******************9***********99************97 PP
2Myb_DNA-binding52.51.1e-1668113148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++T+eE++l +++++ lG++ W++Ia +++ gRt++++k+ w+++l
  Cse_sc035409.1_g010.1  68 RGPFTPEEEQLVIQLHAILGNR-WAAIALRLP-GRTDNEIKNLWNTHL 113
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MVRAPCCEKT RVKRGPWAPE EDDILVNYIN KNGGHGSWRS LPKLAGLLRC GKSCRLRWTN  60
YLRPDIKRGP FTPEEEQLVI QLHAILGNRW AAIALRLPGR TDNEIKNLWN THLKKRLISM  120
GLDPQTHQPS CLEGSAKGLP ASSLTRHMAQ WESARLEAEA RLSMASTALL LLPSPIQTIH  180
PNKTTQPDYI LRIWHSEVGE SFRNRKPVCF SPTSQASVSG TTSEMAPKTE PELDTELSCA  240
TRSDDCTTSY NGLTHPLSPS EMEDSSDTEL QLYFNFHGPN DMSFLETQVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-110MYB family protein