PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035486.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 334aa MW: 37295.2 Da PI: 6.1019

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035486.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.9	3.7e-08	235	277	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ r+RR+ri +++ L++l+P + K++ a++L +A +Y+k L Cse_sc035486.1_g010.1 235 AAARQRRERISERIRVLQKLVPGgN------KMDTASMLDEAANYLKFL 277 567*****************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MDDLQFSWYN MIHAHDHQQQ SFDFNSDSIF LNQLPHLSPT DWTDQAIEND LICTNGFQEI 60 KNVISSNNNA AASLERLLSG PNSRNDASDD GVSIILPDCK SSLWRNNVNE ARNNNGISGV 120 SSADSVTDDG VVTQTLQQIS QFECSSGKRT RETVEISDNQ SNPKRSRSNP SLPTSSNINF 180 QQPGNPSETD TEAIAQMKEM IYREAAFRPV SFAAETVVEK PKRKNVRISS DPQTAAARQR 240 RERISERIRV LQKLVPGGNK MDTASMLDEA ANYLKFLRSQ VKALEQLGHN SKTINAHSYA 300 SLVAPFTQTP FSMQTQYSFP CENLYPNPPS SIHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	243	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	6e-44	bHLH family protein