PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035586.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 216aa MW: 24513.6 Da PI: 6.519

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035586.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.2	3.2e-19	14	128	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e+++ k t+k+ r+r++ r+gC Cse_sc035586.1_g010.1 14 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsvtdndiseqseisddshrfgdvTKKQTRKRTSFRCGC 101 6***************************************999999*******************99999999***** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 +l++kk + +evtk+e HnH+l+ Cse_sc035586.1_g010.1 102 SSSLTIKKI-GNIYEVTKFEDGHNHPLV 128 *****.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MLKLFELEIM LAYNFYVAYG KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK 60 SGDSVTDNDI SEQSEISDDS HRFGDVTKKQ TRKRTSFRCG CSSSLTIKKI GNIYEVTKFE 120 DGHNHPLVAE KDMIFFEEFK EDGVGTTIID CKNQKKKISV FIEDRDAQMA VEKLLSRKLH 180 SPGDDDKLVG LFWADEKAIK DYASFGDIVS FDATFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-11	FAR1 family protein