PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035730.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 185aa    MW: 21052.1 Da    PI: 8.2594
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035730.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-091162255
                           HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                    HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                           r+    +E++RR +++  +++L +l+ ++   +s+   s  + L +A +YIk+Lq
  Cse_sc035730.1_g010.1 11 RVDRRTIEKNRRIHMKALYSKLHSLVAHD---SSREmTSLPDQLHEAANYIKKLQ 62
                           566678**********************8...77777*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEGNPSSSCS RVDRRTIEKN RRIHMKALYS KLHSLVAHDS SREMTSLPDQ LHEAANYIKK  60
LQIKLEKMNE EKNNLMGIKK LEINNNHKIK CLNMMVGQAR APQIEVRETG SSIEAVLITG  120
VDFQFLFSET IRVIHEEGFD VVNAGFSILN DTVFHTIHAQ VGERYAQEDG ASRIKERLSN  180
IVYGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-46bHLH family protein