PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035746.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 300aa    MW: 34254.2 Da    PI: 7.4194
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035746.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.33.9e-17224258135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C +Cg+ +Tp+WR gp g+ktLCnaCG++y++ +l
  Cse_sc035746.1_g010.1 224 CLHCGSHSTPQWRTGPMGPKTLCNACGVRYKSGRL 258
                            99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDYFTNDQYY SKNDKHNDIM INNHNNNEFI LDDLIVDFPN EDDIVLNDAF FHNVVGHEGD  60
SCNSSVSGSD QPPFSDVELC LPYDELIEFE WLSGFTHEAF SIDDVQNHQQ LVSVENKSVA  120
TDTSSSGTDV YSFRSKHEVT HRINSHIFHG NVAVPVKARS SRSRCRDWTS RILHFKQPST  180
LKIKIKQSKT ALFKQPYEVD INTKESKTTQ FKRSELLDGS LTTCLHCGSH STPQWRTGPM  240
GPKTLCNACG VRYKSGRLVP EYRPANSPTY VPAKHSNSHR KVMEIRRQKE LRNVGSGLWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-62GATA family protein