PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035830.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 322aa MW: 36230.2 Da PI: 5.2976

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035830.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.4e-13	145	191	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L +llP + kK++Ka++Le A +YI++Lq Cse_sc035830.1_g020.1 145 DHVLAERKRREKLAQRFISLSSLLPDL-----KKMDKATVLEDAANYIQELQ 191 6889*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MDMPSAWLPE LEMQEQGFMN QYQMNKPYHP LMDDFSVDSF SSESYTENPS FIDQSFQTRK 60 GVEEQADIKQ PSSYKKANSI NNKFTPIIQK PRPKRVSDPP NTFTISFGDI KPKDEILSFS 120 DSYDLTGAGT NKVPVMIRNP IQVQDHVLAE RKRREKLAQR FISLSSLLPD LKKMDKATVL 180 EDAANYIQEL QGRVKELEEL SGLKRKNMQE SVISAKRSRL SCSDDDGSSS NAANLEESSS 240 PINPEIEVKM SGSSMLIEIY SHKNCTSLMK VLSEMQRLGL SVTSSSTMPF ADTTLLITIV 300 AQKSDDFIMS STDLVKNLKL VI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	155	ERKRRE
2	151	156	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22750.2	1e-32	bHLH family protein