PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035941.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 157aa    MW: 17694.7 Da    PI: 4.6543
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035941.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.42.1e-5336130397
                  NF-YB   3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 
                            +q+r+lPianv+rimk++lP+nakisk+aket+qec+sefisfvt+eas+kc++e+rkt+ngdd++w+++tlGf+dy++plk yl +y
  Cse_sc035941.1_g020.1  36 QQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFISFVTGEASEKCKKERRKTVNGDDVCWSMGTLGFDDYAQPLKRYLDRY 123
                            799************************************************************************************* PP

                  NF-YB  91 relegek 97 
                            re+eg++
  Cse_sc035941.1_g020.1 124 REVEGDR 130
                            *****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MPGTEWLTIT STLTPSNLMD DSSNKFTIGE DDTPNQQERL LPIANVGRIM KQILPQNAKI  60
SKEAKETMQE CASEFISFVT GEASEKCKKE RRKTVNGDDV CWSMGTLGFD DYAQPLKRYL  120
DRYREVEGDR SSTSQRNEDE GRPSSSAAEF NPSPKLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.16e-56NF-YB family protein