PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036426.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 30336 Da    PI: 9.4912
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036426.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.23e-30959151
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                           krien++ rqvtfskRrng+lKKA+ELSvLCdaeva++ifs++gklye+ss
  Cse_sc036426.1_g010.1  9 KRIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVALMIFSQKGKLYEFSS 59
                           79***********************************************96 PP
2K-box53.97.7e-191432053597
                  K-box  35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                             R++lG+dL s+sl eL +L ++Le+ l++iR++K +l++eqi++l+ ke+ l een +L ++
  Cse_sc036426.1_g010.1 143 ARKFLGQDLVSCSLGELSELDSKLEHTLRTIRARKAQLFKEQIDKLKSKERYLLEENARLCQE 205
                            49********************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVRGKVELKR IENTTSRQVT FSKRRNGLLK KAYELSVLCD AEVALMIFSQ KGKLYEFSSS  60
NMQKTIEKYR DHVKKDENCN PEMEVNTQQL KDEAAIIQQK IEQLEASQRF FLRHYFPLRP  120
IILLFTLSLE YFFSHYNWIL CMARKFLGQD LVSCSLGELS ELDSKLEHTL RTIRARKAQL  180
FKEQIDKLKS KERYLLEENA RLCQENTSLS QKRVVNPPQQ HSMKQKDAAI CSHASRQFSD  240
VETELFVGLR LYQNAREL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.33e-70MIKC_MADS family protein