PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036472.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 224aa    MW: 25922.2 Da    PI: 9.514
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036472.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.2e-181663148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+ Ed ll ++v+++G g+W+++a + g++R++k+c++rw +yl
  Cse_sc036472.1_g010.1 16 KGPWTPAEDNLLFEYVRMHGEGRWSSVAGCSGLKRSGKSCRLRWVNYL 63
                           79********************************************97 PP
2Myb_DNA-binding48.42.1e-1569112146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            +g  T++E+  ++++++++G++ W+tIar+++ gRt++++k++w++
  Cse_sc036472.1_g010.1  69 KGQLTPQEEGVIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRT 112
                            5778******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MVATMGWRMA EQEWRKGPWT PAEDNLLFEY VRMHGEGRWS SVAGCSGLKR SGKSCRLRWV  60
NYLRPGLKKG QLTPQEEGVI IELHALWGNK WSTIARYLPG RTDNEIKNYW RTNFKKKGTP  120
SQYQEQQKHK VAFRQDLYQQ EVNKMVNNQS KLPQGKMTEN IAVVTNSGTS SDQKHHSQPL  180
TAQDVASLWD NLSEDGLWGG FLWNLDNDHP IKQEAMEQSF SSYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.11e-69MYB family protein