PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036770.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 189aa    MW: 20912.5 Da    PI: 6.227
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036770.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY38.91.8e-1220592359
                           EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY 23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                           +YYrC+++   gC + k+v++ +++p++++itY+g+H+++
  Cse_sc036770.1_g010.1 20 GYYRCAYRqveGCLAVKQVQKVDKEPNIFDITYRGSHTCN 59
                           6******99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MAPLVDTKVG RSLFGLRFPG YYRCAYRQVE GCLAVKQVQK VDKEPNIFDI TYRGSHTCNP  60
GSHQESTSLS LPVSTPRLET QQPPQQNQVV QSPETLLKFQ KSPMAMLENL ETHSFHFPST  120
SNKLFNLPPV DDIHDDPIAC GSISNAVNHL RLDVSVVSAA AISPTSSQNV DVGFRFGELD  180
FGNSFNIFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-15WRKY family protein