PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037071.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 234aa    MW: 27016.3 Da    PI: 7.1125
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037071.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding569.4e-181663148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+ Ed+ll+++v+++G g+W+++a + g++R +k+c++rw +yl
  Cse_sc037071.1_g010.1 16 KGPWTPAEDKLLAEYVALHGEGRWSSVAGCTGLKRNGKSCRLRWVNYL 63
                           79******************************9*************97 PP
2Myb_DNA-binding50.16.3e-1670113247
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            g  +++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++
  Cse_sc037071.1_g010.1  70 GQLSPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 113
                            6779*****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDGMMGWRMA DQGWRKGPWT PAEDKLLAEY VALHGEGRWS SVAGCTGLKR NGKSCRLRWV  60
NYLRPGLKKG QLSPQEEGII IELHALWGNK WSTIARYLPG RTDNEIKNYW RTHFKNSGKP  120
LQHEKKRKYE THLSYNQEQQ VYRTMNTASS SESEENYGGM ITEPSQSTLQ ETTAVAWPEA  180
TMEQQQQNPC VMAQDVARWW DTVSEDGLWS GFLWNQELVH PNQAVIEQSF SPCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.11e-65MYB family protein