PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037202.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 208aa MW: 24519.9 Da PI: 7.0102

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037202.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.3	1.7e-25	74	162	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYneY+ + GF +rk++ +++k+++ei++r++vC+k+g ++ ++k+ + ++r trtgC a+++v+++ +g w+v++++ eHnH Cse_sc037202.1_g010.1 74 DFYNEYGLSKGFGIRKHRVHRHKETNEIYRRELVCNKQGLKNMNDKRrLPDDVKRRCITRTGCMAMIQVTLK-QGLWVVDRFKAEHNH 160 6************************************99998888566788999************.9************ PP FAR1 88 el 89 +l Cse_sc037202.1_g010.1 161 NL 162 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MDNFVNEAQL LSVNIVSYLN GTDDEEEQIL TRNFENDAFS VHDEEEMEPT NVFDESIRYL 60 IMGKTFESLE DVYDFYNEYG LSKGFGIRKH RVHRHKETNE IYRRELVCNK QGLKNMNDKR 120 RLPDDVKRRC ITRTGCMAMI QVTLKQGLWV VDRFKAEHNH NLDLPSQVLK QRSHNIFHRS 180 NECKDVVNLL TKAGMKPAEI TKILFHKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-22	FAR1 family protein