PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037308.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 322aa    MW: 36686.8 Da    PI: 9.8344
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037308.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.37.6e-182976148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +l+ +++q+G g+W++ +++ g++R++k+c++rw +yl
  Cse_sc037308.1_g030.1 29 KGPWTPEEDRKLLSYIQQYGHGSWRSLPAKAGLKRCGKSCRLRWTNYL 76
                           79********************************************97 PP
2Myb_DNA-binding55.61.2e-1782126147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg++  eE++++++++++lG++ W+tIa++++ +Rt++++k++w+++
  Cse_sc037308.1_g030.1  82 RGKFGLEEEKKIIQLHALLGNR-WSTIAAHLP-RRTDNEIKNHWNSH 126
                            899*******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MTISLGRNDK SKKQNNNGDI LGLGIRVKKG PWTPEEDRKL LSYIQQYGHG SWRSLPAKAG  60
LKRCGKSCRL RWTNYLRPDI KRGKFGLEEE KKIIQLHALL GNRWSTIAAH LPRRTDNEIK  120
NHWNSHIKKR MTKMGIDPMT HKPKSGTQLL GTNLNHMAQW EAARLEAEAR LVQKPKNHLN  180
QLSCNHVSPQ PIHDLHKTPT PLPPQNLPCL DVLKVWQGNL WSNYSINNES LQSLISRPKV  240
SVATPVMPIL SNVESNGTFG QGPTMKHNDE IETQVGLFDE FEYANDANFI NDDPLRSPEF  300
WEEFVDVLDV GWSSLTNNFA LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.11e-73MYB family protein