PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037429.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 513aa    MW: 57399.6 Da    PI: 5.0024
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037429.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4418.3e-1351445132374
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                            +e L+ cA+av+++++  a+ l++ l+ l+s  g+p++R+aay++e+L arl++s+s ++k+l+++e +    +e ++++ l++e++P
  Cse_sc037429.1_g020.1 144 KEGLFICAKAVAENKTLTAEGLISMLRPLVSVGGEPTERVAAYMMEGLVARLSSSGSVICKSLKCKEPT---GAELFSYMMLLYEACP 228
                            567999**************************************************************9...999************* PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                            ++kf+hl aN aI ea+++e+r+HiiDf+i qG+QW++L+qaLa+Rp+gpp+lRiTg++++++   +   l+ +g+rLak+Ae++++p
  Cse_sc037429.1_g020.1 229 YFKFGHLSANGAIAEAIKNEDRIHIIDFQIAQGGQWMTLIQALAARPGGPPRLRITGMDDSRNAfaRGGGLNIVGQRLAKIAESCKMP 316
                            ************************************************************98889999******************** PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            fef+  +  +++d+++++Lrv+pgEal+Vn++l lh+l+de+v+ +++rd+v++l+kslsPkvv++veqea+ n+++F++rf ea++y
  Cse_sc037429.1_g020.1 317 FEFHG-IPVSVSDIQIQHLRVQPGEALVVNCALVLHHLPDETVHPQNHRDRVIRLIKSLSPKVVTLVEQEANVNTAKFFDRFQEAFSY 403
                            *****.6999****************************************************************************** PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                            ysa+f+s++a+l r+++eri+vE+++l+ eivn++acegaer+erhe l++Wr+r+++aGF+p+pls+++++++k+ll+++ +  yr+
  Cse_sc037429.1_g020.1 404 YSAMFESIDATLKRDHKERINVEQHCLAGEIVNILACEGAEREERHELLSTWRSRFTKAGFTPYPLSSYVNATIKTLLENYCD-KYRL 490
                            *********************************************************************************95.5*** PP

                   GRAS 352 eeesgslvlgWkdrpLvsvSaWr 374
                            ee++g+l+lgW++r+Lvs SaW+
  Cse_sc037429.1_g020.1 491 EERDGALFLGWMNRALVSSSAWQ 513
                            **********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MGESNQPYYW TTSTEQDTDQ NLYSTDVNQF SVQTPELTNN SITVSFSSNG SPTSLQDSHS  60
FQPEPYHSPD YTYTSQITKS GLEDNVDDLH LRLSEIQAIL ESDHDFAESF DVSSSWGVYD  120
TDNVIPSNDE YQMMEKAVSR GDLKEGLFIC AKAVAENKTL TAEGLISMLR PLVSVGGEPT  180
ERVAAYMMEG LVARLSSSGS VICKSLKCKE PTGAELFSYM MLLYEACPYF KFGHLSANGA  240
IAEAIKNEDR IHIIDFQIAQ GGQWMTLIQA LAARPGGPPR LRITGMDDSR NAFARGGGLN  300
IVGQRLAKIA ESCKMPFEFH GIPVSVSDIQ IQHLRVQPGE ALVVNCALVL HHLPDETVHP  360
QNHRDRVIRL IKSLSPKVVT LVEQEANVNT AKFFDRFQEA FSYYSAMFES IDATLKRDHK  420
ERINVEQHCL AGEIVNILAC EGAEREERHE LLSTWRSRFT KAGFTPYPLS SYVNATIKTL  480
LENYCDKYRL EERDGALFLG WMNRALVSSS AWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein