PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037506.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 622aa MW: 71893.3 Da PI: 9.3018

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037506.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.1	2.7e-47	317	444	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + pGfrFhPtdeelv +yLk+kv++k++ + + ik++diyk++PwdLpk ++++ekewyfF++rd ky+++ r+n +t +Wkatg+ Cse_sc037506.1_g010.1 317 MLPGFRFHPTDEELVGFYLKRKVQEKPFFI-DLIKQLDIYKYDPWDLPKLATTGEKEWYFFCRRDLKYRNSARPNHVTGPEFWKATGT 403 579**********************999.89***********8888999***************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ + + + lkk+Lvfykgra kg ktdW+mhe+rl Cse_sc037506.1_g010.1 404 DRPIYSSdGLRCIALKKSLVFYKGRAAKGFKTDWMMHEFRL 444 **8455669************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MKRKRRLLKE AAKADMRGVC YLSRIPPRMD PIKLRQTLSQ YAELERIYLT PEDPTAHVHR 60 KKAGGFLGQG FTDKSSHSQS TKYQYKAKTT TLKVNGKNRF NIYPREKEVW VLNNKDETKC 120 IVSHVDVGDC DIVEVLENNG DTIKVLSLKR VPGYKSVFRA LEIQKSKEKK VLEIPLADSN 180 RFYCRVPAFL LTVEHDGCLR GSWELDFAEF PGDARRALEI CRRAAELMDY RVKNSTSLPK 240 TAQTVSCFCT SNGITFLGWD TLLRISCKLG ESRIVLCESG ASHRLQKLQL NFSRLVPSIL 300 HIERSETNGD QKMDKIMLPG FRFHPTDEEL VGFYLKRKVQ EKPFFIDLIK QLDIYKYDPW 360 DLPKLATTGE KEWYFFCRRD LKYRNSARPN HVTGPEFWKA TGTDRPIYSS DGLRCIALKK 420 SLVFYKGRAA KGFKTDWMMH EFRLPSMVDR NGQAKWFLEK TIPPNEQWAI CRIFKKVNSS 480 AQRDFSHSWV SPIIPKTPSP EPCQYDKYFC HFDHKPINID PTLSTLSNHH KTTSTFISST 540 QDTNNLFHEP TYNTGVDASL LFNIPSTIFG DFGKGLDNMT SEEQHNFSDN CFSFASIPEM 600 QEQVQDRTND MMFQTPTNVI YR

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MKRKRRLLKE AAKADMRGVC YLSRIPPRMD PIKLRQTLSQ YAELERIYLT PEDPTAHVHR  60
KKAGGFLGQG FTDKSSHSQS TKYQYKAKTT TLKVNGKNRF NIYPREKEVW VLNNKDETKC  120
IVSHVDVGDC DIVEVLENNG DTIKVLSLKR VPGYKSVFRA LEIQKSKEKK VLEIPLADSN  180
RFYCRVPAFL LTVEHDGCLR GSWELDFAEF PGDARRALEI CRRAAELMDY RVKNSTSLPK  240
TAQTVSCFCT SNGITFLGWD TLLRISCKLG ESRIVLCESG ASHRLQKLQL NFSRLVPSIL  300
HIERSETNGD QKMDKIMLPG FRFHPTDEEL VGFYLKRKVQ EKPFFIDLIK QLDIYKYDPW  360
DLPKLATTGE KEWYFFCRRD LKYRNSARPN HVTGPEFWKA TGTDRPIYSS DGLRCIALKK  420
SLVFYKGRAA KGFKTDWMMH EFRLPSMVDR NGQAKWFLEK TIPPNEQWAI CRIFKKVNSS  480
AQRDFSHSWV SPIIPKTPSP EPCQYDKYFC HFDHKPINID PTLSTLSNHH KTTSTFISST  540
QDTNNLFHEP TYNTGVDASL LFNIPSTIFG DFGKGLDNMT SEEQHNFSDN CFSFASIPEM  600
QEQVQDRTND MMFQTPTNVI YR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	2e-93	NAC family protein