PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037587.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 257aa MW: 29488.2 Da PI: 7.4316

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037587.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.3	1.1e-51	11	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhP+deelv++yL +k++ ++ +l + evd++k+ePwdLp+++ + kewyf+s+rd+kyatg r+nrat sgyWkatgk Cse_sc037587.1_g020.1 11 LPPGFRFHPRDEELVCDYLFNKLSLSDSHL---LVEVDLNKCEPWDLPETACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGK 95 79********************999666...99*********7777799***************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d+++++ +++lvg++ktLvfy grapkg+ktdWvmhe+rl Cse_sc037587.1_g020.1 96 DRSIFR-NRTLVGMRKTLVFYLGRAPKGKKTDWVMHEFRL 134 **.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MSNLSLVEAT LPPGFRFHPR DEELVCDYLF NKLSLSDSHL LVEVDLNKCE PWDLPETACV 60 GGKEWYFYSQ RDRKYATGLR TNRATVSGYW KATGKDRSIF RNRTLVGMRK TLVFYLGRAP 120 KGKKTDWVMH EFRLQGSLAP PVDSSIKEDW VLCRVFCKNN REQVDEKQNS NMGSISEHVG 180 HEDTLSCSSS LPPLMDQPYT FSFDQSQPTN NNNIYNQQQV PCFSNIFNIY SSPQFDLINN 240 NNRHIFTTTG TTIPPPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-95	NAC family protein