PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037673.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 255aa    MW: 28205.9 Da    PI: 6.6614
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037673.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-114785847
                           HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           Ed  lvd+v+  G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc037673.1_g020.1 47 EDMCLVDLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 85
                           8999*********************.***********985 PP
2Myb_DNA-binding48.81.6e-1594136347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc037673.1_g020.1  94 PFTPHEDDVILRAHVIHGNK-WSVISKLLP-GRTDNAIKNHWNST 136
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVWNKRRCVS VSVSDVSSCD GITLLTLLPP GDGEKKKGGD EVEKEIEDMC LVDLVETQGA  60
RNWSVIGSSI PGRSGKSCRL RWCNQLSPNV QHRPFTPHED DVILRAHVIH GNKWSVISKL  120
LPGRTDNAIK NHWNSTLRRR GLTLTRSSES ESTQSDDNDD EGLGFKKNKR RCVSVSDVSS  180
CDGMTVLTLL PPGDGEKKKD GDEVEKGTVE IDDTCLVDVM KKMIAKEVRS YIDELRAKDG  240
LSFGAVLRPV AQQSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.12e-38MYB family protein