PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc038064.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 222aa    MW: 25297.4 Da    PI: 5.4841
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc038064.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.84.5e-10159209148
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....t 48 
                            ++Yn+YA+ +GF+v+ks+++++ +ng ++++ ++C++eg +++ + +    +
  Cse_sc038064.1_g010.1 159 EMYNKYAEVAGFEVKKSAQRNT-KNGMVKSKYLMCNREGVPKDININtldlK 209
                            58**************998887.8888************9998766644441 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MTDPPPSPLH HHDRSNTIIN LAPSLLHNHN CSTTITAPPR SPLHHHHQST TITAPPSSIH  60
HDHRSPLIME NNDVFDENIY EDEFMVDAEV MNVDDTLVDA EIMEEEDTPV IQGPVMTPRP  120
TLYAHEENPG GSVYWEPVVD YIYLPVEGKK FKMIEECIEM YNKYAEVAGF EVKKSAQRNT  180
KNGMVKSKYL MCNREGVPKD ININTLDLKS SDKQVRNTRQ RG