PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc038149.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 177aa    MW: 20105.8 Da    PI: 10.2055
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc038149.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.62.2e-1821991195
                           HHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                     B3 11 lksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                               +l+lp  f +++    ++kk +   l+  ++sg +W+vk+  +k  gry+l++GW +F k+n+L+ gDf+vF   +r++   ++ 
  Cse_sc038149.1_g020.1 21 V---NLSLPDAFGKKYlekcNSKK-QRLGLKTSNQSGVKWSVKY--SKINGRYYLRDGWLKFMKDNNLQMGDFLVFW--RRTKL--TFN 99
                           3...388*****999999974333.445799999**********..******************************9..33444..333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MKYKNGNEDS FFKIILQDSA VNLSLPDAFG KKYLEKCNSK KQRLGLKTSN QSGVKWSVKY  60
SKINGRYYLR DGWLKFMKDN NLQMGDFLVF WRRTKLTFNV FVYAPNGCLK QPTSSSSSSS  120
SGSDDHTAVG SGDDGKKVFV KEESSDDDGL SKNVEKFTRR VVKQNSKTIM VVINFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.12e-10B3 family protein