PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc038162.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 172aa    MW: 20276.5 Da    PI: 10.5263
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc038162.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.5e-161461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W++eEd +l d+++++G  +W+  +++ g+ R++k+c++rw +yl
  Cse_sc038162.1_g020.1 14 KGAWSEEEDNKLRDYIERYGHWNWRELPKYAGLARCGKSCRLRWMNYL 61
                           79******************99************************97 PP
2Myb_DNA-binding54.82.2e-1767112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++T+eE++++++++  +G++ W++Ia+ ++ gR+++++k++w+++l
  Cse_sc038162.1_g020.1  67 RGNFTKEEEDIIIKLHLDMGNK-WSAIAALLP-GRSDNEIKNHWHTHL 112
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MVRAPCIDKN GIKKGAWSEE EDNKLRDYIE RYGHWNWREL PKYAGLARCG KSCRLRWMNY  60
LRPSVKRGNF TKEEEDIIIK LHLDMGNKWS AIAALLPGRS DNEIKNHWHT HLKKRNTKQN  120
HHVVHEVKDE QKLNVSRIIN FSVLPPSVAS XXXXXXXTQY QTKSPRCSRS KR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.17e-59MYB family protein