PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc038325.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 357aa MW: 40017.1 Da PI: 5.6767

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc038325.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.3	1.9e-16	27	116	21	128
NAM 21 kkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvf 108 + +gk+l++ +v ++v+ yk++P+dLp v + wy s n+ ++ gyW +tg+ +e++s +++ +g ++tL + Cse_sc038325.1_g020.1 27 NFKSGKPLPM-NVTSDVNPYKYKPSDLP--V----DLWYLCSGV----------NKDAECGYWLETGEAHEIFS-NSAIIGYRTTLQY 96 4446777788.78899999999999998..2....335544433..........334578************.999****** PP NAM 109 ykgrapkgektdWvmheyrl 128 y+gr p+g+ktdWvm+ey++ Cse_sc038325.1_g020.1 97 YEGRVPHGRKTDWVMQEYKI 116 ****************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MCPSTCIPLA AENEYWTDEG IFMSLLNFKS GKPLPMNVTS DVNPYKYKPS DLPVDLWYLC 60 SGVNKDAECG YWLETGEAHE IFSNSAIIGY RTTLQYYEGR VPHGRKTDWV MQEYKITDKC 120 NNNMKKDHRS LCRVFLADSK RSPYGHFIAN IDVKISINLG PTTVSNMNSR GHDSTRELME 180 KTMGNNTGSS LMTMASQDPS LGNDNEMDCI LRGDYFELND LVDPVSCSSS STNSSCLSMT 240 SDEYFDSMAL LQELDGDVTH QDITDLSVKF NLSAPVKSKE VIVRPATLVS LRNHEDCKPL 300 GQKTYAVENK NQNSSNGVYI TTASLSSSEN PSKDGKKENA RRIKWCKVMK YLCCLAF

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MCPSTCIPLA AENEYWTDEG IFMSLLNFKS GKPLPMNVTS DVNPYKYKPS DLPVDLWYLC  60
SGVNKDAECG YWLETGEAHE IFSNSAIIGY RTTLQYYEGR VPHGRKTDWV MQEYKITDKC  120
NNNMKKDHRS LCRVFLADSK RSPYGHFIAN IDVKISINLG PTTVSNMNSR GHDSTRELME  180
KTMGNNTGSS LMTMASQDPS LGNDNEMDCI LRGDYFELND LVDPVSCSSS STNSSCLSMT  240
SDEYFDSMAL LQELDGDVTH QDITDLSVKF NLSAPVKSKE VIVRPATLVS LRNHEDCKPL  300
GQKTYAVENK NQNSSNGVYI TTASLSSSEN PSKDGKKENA RRIKWCKVMK YLCCLAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	4e-19	NAC family protein