PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc038408.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 197aa MW: 22545.2 Da PI: 10.0945

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc038408.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.5	2.1e-13	2	93	5	90
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 +YA+++GF vrks +k+ r+g ++++ +v ++eg ++ + + +ek++r+++ + +gCka ++ ++ + k+++t +++ HnH Cse_sc038408.1_g010.1 2 KYASKAGFVVRKSCQKRL-RSGIVKQKYLVYNREGCPKGIHVDtldlenSEKQKRSSNLHIIGCKALVMFELIPgSTKYKLTVFDSIHNH 90 7*********998887.8888*********999888789998889999999999**********9************* PP FAR1 88 ela 90 el Cse_sc038408.1_g010.1 91 ELE 93 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MKYASKAGFV VRKSCQKRLR SGIVKQKYLV YNREGCPKGI HVDTLDLENS EKQKRSSNLH 60 IIGCKALVMF ELIPGSTKYK LTVFDSIHNH ELERKEYKHL SKNERQLTYA KQLFIVKAAS 120 VNIGATRAHH LLTGLKGSYL LVHGTTVDFK NFFRSVNCYI GDSDAQMLIA KMENRKKHVP 180 DFSFDYLVEN AELSAIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-06	FAR1 family protein