PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc038998.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 166aa    MW: 19510.4 Da    PI: 9.8568
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc038998.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind59.11.2e-18141014103
                            HHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
           HSF_DNA-bind   4 kklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                             k y+i+ ++ ++ +isw  n   + v+  +ef ++v p +Fk +nf SF+ QLn YgFkk++ +           e++ ++F++gk 
  Cse_sc038998.1_g010.1  14 YKDYNIVCNKGTDFIISWVPN---LNVSGGDEFINNVPPLMFKSKNFDSFITQLNNYGFKKMSWDC---------REYAYEWFQEGKP 89 
                            6889***************99...99*************************************988.........47*********** PP

                            XXXXXXXXXXXX CS
           HSF_DNA-bind  92 ellekikrkkse 103
                            +ll++ikr++++
  Cse_sc038998.1_g010.1  90 HLLKSIKRRTKQ 101
                            *********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
HFPTALPPLV NKLYKDYNIV CNKGTDFIIS WVPNLNVSGG DEFINNVPPL MFKSKNFDSF  60
ITQLNNYGFK KMSWDCREYA YEWFQEGKPH LLKSIKRRTK QTISESEKLQ REIKKLESAS  120
KEQDNELNVF KAYVDNTISN QKIILQTMAR TMKSIIDHPH QVRKLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19298LKSIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54070.11e-21HSF family protein