PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc039116.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 156aa MW: 18272.9 Da PI: 9.8043

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc039116.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3e-08	11	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W eEd++l+ +++++G +W+ +r g+ R + +c++ w yl Cse_sc039116.1_g040.1 11 KGAWNVEEDQKLIMYINRYGIWNWSQMPRFAGLSRVR-SCRLQWIYYL 57 79****************99******66666.****8876 PP
2	Myb_DNA-binding	40.9	4.7e-13	64	121	2	48
SSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqkyl 48 g+++ eE+e+++ + qlG+ W++Ia +++ gR+++++k++w+++l Cse_sc039116.1_g040.1 64 GNFSGEEEEIILVSHSQLGNSignlityvylpyKWSAIALRLP-GRSDNDVKNHWHSHL 121 78999*************9******************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MEGEMSTDLK KGAWNVEEDQ KLIMYINRYG IWNWSQMPRF AGLSRVRSCR LQWIYYLISN 60 VKNGNFSGEE EEIILVSHSQ LGNSIGNLIT YVYLPYKWSA IALRLPGRSD NDVKNHWHSH 120 LKKRASEQNL VCGSPWFKIA FCDPMRSRSQ RLMRNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	1e-36	MYB family protein