PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039356.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 520aa    MW: 57789.8 Da    PI: 8.2744
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039356.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.88.4e-1817101999
                            HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                     B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                            ++ + ++l +p kf ++ +gk +++ t++l+ +sg++W   l  +++ ++ ++ +GW  Fv+++ L+ +D++vFk+dg+  f  +v++
  Cse_sc039356.1_g010.1  17 NNITFDQLKIPSKFSKHLEGK-TCG-TVSLMGPSGNTWHADL--SQQNDALYIVDGWAAFVRDHFLEKRDSLVFKYDGNLHF--TVQI 98 
                            4555589*******9666776.565.9***************..999999**************************997777..9**9 PP

                            E-S CS
                     B3  97 frk 99 
                            f++
  Cse_sc039356.1_g010.1  99 FDQ 101
                            997 PP
2B344.23.4e-142413191798
                            E--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                     B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                             +p +fa +h   ++++++l+l +++g+sW+++    +k + ++++ +GW +Fv++n++ ++D+++F+l+g+ e  l+v ++r
  Cse_sc039356.1_g010.1 241 NVPYQFAMAHL--PNCKVKLVLHNLKGESWTINSVPtTKVQTSHTFCGGWLSFVRDNKISVRDVCIFELVGKCE--LRVNILR 319
                            479****9996..45999***************9655666677**************************99544..4888876 PP
3B350.63.5e-16401495196
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 
                            f+kv+++ +v+ s+ l +p +f  eh   + +++++ l +++g+ W+v+   + k ++ + + +GW  Fv++ng++ gD+++F+l+gr
  Cse_sc039356.1_g010.1 401 FVKVMKKFNVSGSSTLKVPYQFSMEHL--PSCKTKILLHNLKGECWTVNSVATIKVQTlHSFCGGWIAFVRDNGIQMGDICIFELIGR 486
                            899*******************99995..458899***************8888888889999************************9 PP

                            SEE..EEEE CS
                     B3  88 sefelvvkv 96 
                             e + +v+ 
  Cse_sc039356.1_g010.1 487 CELRVHVSR 495
                            988777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MNAPTTRPPH FIINPNNNIT FDQLKIPSKF SKHLEGKTCG TVSLMGPSGN TWHADLSQQN  60
DALYIVDGWA AFVRDHFLEK RDSLVFKYDG NLHFTVQIFD QSSCEKETAF SAECHQDLSI  120
FDQNFGKKRE RECASLLTNM AGCVPKKARS SLANEATNIA ETQLGLQETI NGRCEVADLL  180
NGSGLSGSGL KNSITHALPL SEVCPNEDEF DRIPASEADK IAQAYSSNFP HFTKVMKGFN  240
NVPYQFAMAH LPNCKVKLVL HNLKGESWTI NSVPTTKVQT SHTFCGGWLS FVRDNKISVR  300
DVCIFELVGK CELRVNILRV RQEPLDYENS DVNGSNSRTS HKISGRLTKT VKGSDDGSQP  360
IGKAKGLRVK RGSSMMGCMS IKSEPEERIA AESFISNFPY FVKVMKKFNV SGSSTLKVPY  420
QFSMEHLPSC KTKILLHNLK GECWTVNSVA TIKVQTLHSF CGGWIAFVRD NGIQMGDICI  480
FELIGRCELR VHVSRFGKNV IDFEYQTGNG SSNKLANEPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-15B3 family protein