PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039424.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 171aa    MW: 19606.6 Da    PI: 8.871
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039424.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-091457753
                           HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                           + E+ RRdr+++ +++L +ll  +   p++K+s  + Le+A+e +k+
  Cse_sc039424.1_g010.1 14 AKEKERRDRMKDLYSTLATLLQLQ---PHEKMSLPDLLERATEVLKQ 57
                           57**********************...*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MRRRSSVPQQ PPAAKEKERR DRMKDLYSTL ATLLQLQPHE KMSLPDLLER ATEVLKQCKE  60
RVEGLKSRRM ELEKDSKGES SNNIQKLQQF VQVREVVDLQ LEANLKILVN NKKVAPFNIL  120
RVIEEGGTHV TSSNFCTVGH HLFCTIHAEA SNARVGFDAE LIESRLLELV Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.12e-18bHLH family protein