PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039807.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 237aa    MW: 26598.6 Da    PI: 8.3709
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039807.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.2e-125298354
                           HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                             h+e+ErrRR+riN  +++Lr++lP        K +Ka+ L ++v+ +k+L
  Cse_sc039807.1_g010.1 52 NRHSEAERRRRKRINGHLATLRSILPAT-----VKTDKASLLAEVVRRVKEL 98
                           67*************************8.....7************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MMQYLPSHGY EFANCASIIR NLVYDHGGKD LSNNTEANVA AEAEAKAAAA CNRHSEAERR  60
RRKRINGHLA TLRSILPATV KTDKASLLAE VVRRVKELKK MAAEIESTAM DQSDDIIRNN  120
ECYMIPTEKD ELELTYVGED SSTKKIMIKA RLCCDDRAEL IAELTRALSL VHAKLVRAEI  180
GTLGGRIKCV LWVQVSSVTI DQGIHELQRS LKVVMDRATL LDMPRNKRPR FSDSVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-32bHLH family protein