PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc040030.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 142aa    MW: 16415.6 Da    PI: 8.626
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc040030.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.41.8e-102243122
                           ---SS-EEEEEEE--TT-SS-E CS
                   WRKY  1 ldDgynWrKYGqKevkgsefpr 22
                           l+Dgy+WrKYGqKe+ ++++pr
  Cse_sc040030.1_g020.1 22 LNDGYSWRKYGQKEILNAKYPR 43
                           58*******************9 PP
2WRKY29.41.5e-09651012559
                            EEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  25 YrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                            Y  t+a  +C+++k+v+r +edp+++e++++g+H+++
  Cse_sc040030.1_g020.1  65 YLPTYAwlSCNATKQVQRPDEDPSIFEVIFRGQHTCP 101
                            555666679**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
NRIIRPKHQL RVSKGIEFEK LLNDGYSWRK YGQKEILNAK YPRYIHSLFL TAHNSILLRH  60
NKHVYLPTYA WLSCNATKQV QRPDEDPSIF EVIFRGQHTC PTVLSNNCSS TPTESIETNS  120
ASLITASHME QAEWLSLLCS NE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-18WRKY family protein