PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc040068.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 305aa    MW: 34825.4 Da    PI: 6.1978
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc040068.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.11e-40712143135
                    TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas...nss 86 
                             kkd hskihT++g+RdRRvRls+e+ ++fF Lqd LGfdk+skt++WL++++k +i+el++ +  s+s++ +++s+++ ++   +  
  Cse_sc040068.1_g020.1  71 SKKDHHSKIHTAQGPRDRRVRLSIEVSRKFFFLQDLLGFDKASKTLDWLFTKSKISIDELVERKKLSSSSTvTDQSEVVFQEtvkE-- 156
                            69*************************************************************66665444444444444442220.. PP

                    TCP  87 sg..........kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135
                             +          kaa+++a++k+++    +  +l  +sra+arararert+ek + k  
  Cse_sc040068.1_g020.1 157 -RsneqdkglkkKAAPKSAEGKRKKLTRYNSGSLVTQSRAEARARARERTKEKLNVKRL 214
                            .12334455666666666667777767777799999*****************998855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
LASSNHVIPT SNSLFEHEND NYNDYQSNTS LLAEGCIDPF GEKDFLEGLG FEQCEEYNHV  60
LGSEEKKGKI SKKDHHSKIH TAQGPRDRRV RLSIEVSRKF FFLQDLLGFD KASKTLDWLF  120
TKSKISIDEL VERKKLSSSS TVTDQSEVVF QETVKERSNE QDKGLKKKAA PKSAEGKRKK  180
LTRYNSGSLV TQSRAEARAR ARERTKEKLN VKRLDNESKS AHDDSFTTNV TLQSCFWSEI  240
ESEIDCNDDN RESILEERIS MLYSYQHNLA VFNDSSCLSE ITVAHEQQGD RIAQDETTSS  300
DRHSQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166180KKKAAPKSAEGKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-21TCP family protein