PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc040530.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 159aa    MW: 17750.3 Da    PI: 7.8247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc040530.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-202475256
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                           +y+G+r+++ +gr++AeIrdp+ ng  +r +lg+f+taeeAa+a+++a+ +l+g+
  Cse_sc040530.1_g040.1 24 KYRGIRRRP-WGRYAAEIRDPTRNG--ARSWLGTFDTAEEAARAYDRAAYALRGH 75
                           8********.**********98887..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MSTPMDANQE GAGSSSDRGR RENKYRGIRR RPWGRYAAEI RDPTRNGARS WLGTFDTAEE  60
AARAYDRAAY ALRGHQAILN FPNDGHYRNA SSPTTTELPL GTHSSTSMSS SPSSSSLVMP  120
SRENNGRTET EPVIELEYLD NKLLEDLLTK HSPNSRDYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.15e-27ERF family protein