PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc040568.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 449aa MW: 51905.9 Da PI: 9.2652

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc040568.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.6	5.4e-10	90	132	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ +rr+ra++r+gCka l+++++ ++k++v+++ ++HnH+l+ Cse_sc040568.1_g020.1 90 KVIKRRKRASQRCGCKALLRLRQTLKNKYVVYTFFEKHNHSLV 132 35799************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MHQVPAAALR GYPSSNNVCE PSTPRSTNTV QDNVVDAQSV PQAGSYQPTP PGSKFWIPEA 60 KKKPIEGTEF DTIEQALQFY KEYAREEVVK VIKRRKRASQ RCGCKALLRL RQTLKNKYVV 120 YTFFEKHNHS LVHENDYKYL RAARKLTFSK QQFLRQLSNA NIGPTRAWKV MKEMYGGFEN 180 IGVTDVECRN YRRGLDIFIG NRDAQMVVEN LLSRQEFFSN FFVEYKQDKK DKTLVGLFWV 240 DSQAKLNYAA FGDVVSFDAT FRSNSKGWVV IHLFIYNTTL GFMYLQKRNI HEVVRIYPTS 300 TNSDCVVDAT VREIYTNIEE SINHLIGDIQ KLHIYRDDQL ALMQKSRVDV PNPPRQNTNE 360 AYARTLGVTE PAELTILTPT DINNKGNVVR TRRKSKFELA TELGDKPKRM CKSCGKLARH 420 DFRNCPKKKK DLQDEDVDED EDQFMDDSE

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MHQVPAAALR GYPSSNNVCE PSTPRSTNTV QDNVVDAQSV PQAGSYQPTP PGSKFWIPEA  60
KKKPIEGTEF DTIEQALQFY KEYAREEVVK VIKRRKRASQ RCGCKALLRL RQTLKNKYVV  120
YTFFEKHNHS LVHENDYKYL RAARKLTFSK QQFLRQLSNA NIGPTRAWKV MKEMYGGFEN  180
IGVTDVECRN YRRGLDIFIG NRDAQMVVEN LLSRQEFFSN FFVEYKQDKK DKTLVGLFWV  240
DSQAKLNYAA FGDVVSFDAT FRSNSKGWVV IHLFIYNTTL GFMYLQKRNI HEVVRIYPTS  300
TNSDCVVDAT VREIYTNIEE SINHLIGDIQ KLHIYRDDQL ALMQKSRVDV PNPPRQNTNE  360
AYARTLGVTE PAELTILTPT DINNKGNVVR TRRKSKFELA TELGDKPKRM CKSCGKLARH  420
DFRNCPKKKK DLQDEDVDED EDQFMDDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-26	FAR1 family protein