PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc040852.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 318aa MW: 35907.4 Da PI: 10.1003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc040852.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.7	1.4e-05	80	124	2	32
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC................ CS HLH 2 rrahnerErrRRdriNsafeeLrellPkas..............k 32 + h +Er RR++i + ++ L lP + + Cse_sc040852.1_g010.1 80 KLVHRVIERERRKNITKLYASLGAQLPYEFikipslisfqqpatN 124 6679***********************987677777666665550 PP
2	HLH	23.2	1.2e-07	181	226	1	32
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC................ CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas..............k 32 r+ h e+Er+RR+++ + ++ Lr llP + + Cse_sc040852.1_g010.1 181 RKLVHREIERQRRQDMAKLYASLRGLLPLEFvkrdqlkkfvetsvS 226 5678************************976566555555555552 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MISLHQSGEL VYHEIPSTIS FRNQQDLIVN LHDHVAIDGN TNQAGSNTRK RVRDHSSYKA 60 NSGIIVHGLR DNKDENMQKK LVHRVIERER RKNITKLYAS LGAQLPYEFI KIPSLISFQQ 120 PATNQQDLRS VEDKDHVTTE GNINKSVSKT RKSRQEDQSP SSSKPNSANP EDSTKDEHAQ 180 RKLVHREIER QRRQDMAKLY ASLRGLLPLE FVKRDQLKKF VETSVSGLGT KSNEKNLTNL 240 LPNTVSLHSS NGGIQISINS SLSRILKAIS EDGFKVITCT CNKVNDRLIH SIQAEVNDPV 300 LTDLSMLQQR LTGVANNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25400.1	3e-21	bHLH family protein