PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc041048.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 693aa MW: 80510.1 Da PI: 8.4784

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc041048.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.2	4.2e-11	17	69	47	90
FAR1 47 k.........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++ +rr+ra+ r+gC+a+l++kk+ dgk+ vtkl ++HnH l+ Cse_sc041048.1_g030.1 17 TqnanplgvtKVIKRRKRASCRCGCTAQLRLKKRPDGKYFVTKLIEKHNHILV 69 134556666677899***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
QGFKPTRKPE DSQTDKTQNA NPLGVTKVIK RRKRASCRCG CTAQLRLKKR PDGKYFVTKL 60 IEKHNHILVY EDDIKYLRAS RRLTFTKQQL INKLSNVNIG PVRSWKVMKE MYGGFEYIGA 120 TDVECKNYRC GLNDFIGGRD AQMVVDKLLS REEFFTDFSV KYNVDEKTKA LVGLFWADEQ 180 AKRNYVAFGD VVSFDATFHS NRYNMVLVPF IGIDNHNRCI IFAAALLATE SAIRYTWLLK 240 KFKKVFVKVP KVVVTDQDPS MKIAIEEMLP DTRHRLCMWH IMQKLTTKVG PALCSNTDFK 300 RRLCDIVWTD KIEPDVFDEQ WHTIIQDFHL GEHKWLHDMF EMRSKWIPAY FRNEPMSGLM 360 HTTSRSESEN HFFGQLTNPH LSLIEFLSHF DTAMDSQRYK YGKNTHASRY KTPDLKTHLQ 420 VEKEAAELYT HSLFYDVQDE IWSSLYHCCS LSVQEDDTSY TYVIRDTEAD YKINGVSVEV 480 KYKVKFVPSD CSVYCSCLKY ECYGLLCRHI FYVLRLSKVY HFPRKYLLRR WSKNALPNKS 540 VRRQIDVASS SNPVEFVNGV IREIYVSVED SVTRLVTDIQ KLDIYKDDVA ALLEQVKLDI 600 PDAPEMNKNE LYAAALGVKE PVEVNIIAPE CRNKGSVSLK RHQTQAEIAI IQSNKPPRHC 660 SYCDTYGYHD SRNCPKKKAD LDAQMSDTND DQE

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

QGFKPTRKPE DSQTDKTQNA NPLGVTKVIK RRKRASCRCG CTAQLRLKKR PDGKYFVTKL  60
IEKHNHILVY EDDIKYLRAS RRLTFTKQQL INKLSNVNIG PVRSWKVMKE MYGGFEYIGA  120
TDVECKNYRC GLNDFIGGRD AQMVVDKLLS REEFFTDFSV KYNVDEKTKA LVGLFWADEQ  180
AKRNYVAFGD VVSFDATFHS NRYNMVLVPF IGIDNHNRCI IFAAALLATE SAIRYTWLLK  240
KFKKVFVKVP KVVVTDQDPS MKIAIEEMLP DTRHRLCMWH IMQKLTTKVG PALCSNTDFK  300
RRLCDIVWTD KIEPDVFDEQ WHTIIQDFHL GEHKWLHDMF EMRSKWIPAY FRNEPMSGLM  360
HTTSRSESEN HFFGQLTNPH LSLIEFLSHF DTAMDSQRYK YGKNTHASRY KTPDLKTHLQ  420
VEKEAAELYT HSLFYDVQDE IWSSLYHCCS LSVQEDDTSY TYVIRDTEAD YKINGVSVEV  480
KYKVKFVPSD CSVYCSCLKY ECYGLLCRHI FYVLRLSKVY HFPRKYLLRR WSKNALPNKS  540
VRRQIDVASS SNPVEFVNGV IREIYVSVED SVTRLVTDIQ KLDIYKDDVA ALLEQVKLDI  600
PDAPEMNKNE LYAAALGVKE PVEVNIIAPE CRNKGSVSLK RHQTQAEIAI IQSNKPPRHC  660
SYCDTYGYHD SRNCPKKKAD LDAQMSDTND DQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-80	FAR1 family protein