PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc041073.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 133aa    MW: 14613.9 Da    PI: 7.7964
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc041073.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB28.73.3e-09102132232
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdak 32 
                            +eqd+flPia +s im+k +P+n ki+kda+
  Cse_sc041073.1_g050.1 102 KEQDNFLPIASISWIMNKRVPTNKKIAKDAR 132
                            89***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MVEMHKALCS LQLYVMISRP KSYKHNGSDV RDECINFCRR NLINKDMVEK EVSVMVFADN  60
NVSTIMAAIG EGCIPLQDPA SPCGGGSHES CGDISPTAGN AKEQDNFLPI ASISWIMNKR  120
VPTNKKIAKD ARL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-15NF-YB family protein