PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc041132.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 206aa MW: 23407.1 Da PI: 8.0479

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc041132.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.9	8e-19	56	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y k+ GF+ r+ ++k k t + f Cs++g +e+++ k ++k+ r+r++ r+gC Cse_sc041132.1_g010.1 56 NFYVAYDKKGGFDCRRGGQYKAKCFSDATLKYFHCSRQGLNEDSNGKsgdsvtdndiseqseisddshrfsdvKKKQTRKRTSFRCGC 143 6***************************************999999*******************99899999999** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l++kk + +evtk+e HnH+l+ Cse_sc041132.1_g010.1 144 SASLTIKKI-GNIYEVTKFEDGHNHPLV 170 *****.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MLTENDSVSA DVESVRIRDH VGFYVCGKDG TRTWYPDFLE KPIEGCQFIS IDQAYNFYVA 60 YDKKGGFDCR RGGQYKAKCF SDATLKYFHC SRQGLNEDSN GKSGDSVTDN DISEQSEISD 120 DSHRFSDVKK KQTRKRTSFR CGCSASLTIK KIGNIYEVTK FEDGHNHPLV AEKDMIFLKN 180 SRKMGYTKQH FLYQVSNANF GPAVGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	2e-07	FAR1 family protein