PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc041604.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 275aa MW: 30025.5 Da PI: 4.5107

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc041604.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.6	9.4e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC++C ++ H H++vp+ Cse_sc041604.1_g010.1 4 QCNVCETAEATMLCCADEAALCKSCDEKVHAAnklaskHQRVPI 47 7****99*******************66899999999997 PP
2	zf-B_box	30	1.1e-09	52	86	1	35
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHk 35 ++++kC+ ++e +fC +++ llC++C l++H Cse_sc041604.1_g010.1 52 NQMPKCDICQETDGYFFCLEDRALLCRKCDLAIHT 86 689******99******************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MKIQCNVCET AEATMLCCAD EAALCKSCDE KVHAANKLAS KHQRVPISNS NNQMPKCDIC 60 QETDGYFFCL EDRALLCRKC DLAIHTVNSL VSSHQRFLLT GVKIGLETTD DVATSTVKSI 120 PCEKITEAAE SLCVSVSENS QYNNVLPVQA AEVGDFAPPK LPFGGGSSAD GIQQWQFDDF 180 FGLSDLNQGY NYIDNNSSKA DSNKMGDSDC SSILRAMEVE LDSDDCLGQV PDSSWSVPEI 240 HSPPTASGLC WPKHHNHNHH QIDTPAFVPD VILEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-90	DBB family protein