PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc042083.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 236aa    MW: 26624.7 Da    PI: 5.132
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc042083.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-1964114155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Cse_sc042083.1_g010.1  64 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 114
                            68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MKNQSLVCTK MSVDDNSNSE HDDYISNSCT SPLSSSGSIH PLSNSQNPET KTVKRSRDSN  60
TRHPVYRGVR MRSWGKWVSE IREPRKKSRI WLGTFPTPEM AARAHDVAAL SIKGSAAMLN  120
FPDLVGSLPR PNSCSPRDVQ AAAAKAAAMT EFEFHSQSVE TTSEELDEII ELPVLGPTFD  180
SLELKNDFVY NDPMMDGWLY PPPWMNNIHG GDQEERYVTG QENMIFSTFE SVWWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-61ERF family protein