PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc042686.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 178aa    MW: 19699.9 Da    PI: 4.6825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc042686.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-191666155
                    AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           sgy+GVr +k +g+Wv+eI++      k+ r++lg+f t+e+Aa+a++aa+ +l+g
  Cse_sc042686.1_g020.1 16 SGYTGVRKRK-WGKWVSEICElG----KNSRIWLGSFETPEMAAAAYDAAAFYLRG 66
                           89*****999.*******88844....47*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MNEGVHRSTS GGGTSSGYTG VRKRKWGKWV SEICELGKNS RIWLGSFETP EMAAAAYDAA  60
AFYLRGDIAK LNFPERVNSL PRPVNSSAES IRMVAQEAAL QLRPSIQQYE HEQGGSSSGH  120
TVPVNVGLSP SQIQAINDEP LDSPKLWMNL SEYVTNNAYF DPMCDWEDIP ADYSLWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.14e-42ERF family protein