PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc042881.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 134aa    MW: 15724.6 Da    PI: 11.1077
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc042881.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.5e-1764105143
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 
                            +g+WT+ Ed+ l+++v+++G   W+tIa++++ gR +kqc++r
  Cse_sc042881.1_g010.1  64 KGPWTKKEDKDLIRLVEKYGAQKWSTIAQHLP-GRIGKQCRER 105
                            79******************************.********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MILQTRHFKP GICTAQSTSR MKNHANGTLL MAHKVSKESM LNVSRTEQTC LHRWQKVLNP  60
ELVKGPWTKK EDKDLIRLVE KYGAQKWSTI AQHLPGRIGK QCRERPSNLD FFMAHMVIHM  120
KLFLWMLGRL NIRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.29e-33MYB family protein