PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043206.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 293aa    MW: 33512.6 Da    PI: 5.2355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043206.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.22e-50191521127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                            lppGfrFhPtdeel+v+yL +k ++ +      +  ++i++vd+yk+ePwdLp+++  ++kewyfF++rd+ky++g+r+nr+t++gyW
  Cse_sc043206.1_g010.1  19 LPPGFRFHPTDEELIVHYLSHKSRSMEpfasvASPPSIIADVDLYKHEPWDLPEMALFGTKEWYFFTPRDRKYPNGSRPNRVTRNGYW 106
                            79*********************999977654222348***************77667999*************************** PP

                    NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                            katg dk+++sk   + +vg+kk Lvfy g+  kg kt+W+mheyr
  Cse_sc043206.1_g010.1 107 KATGADKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 152
                            ***********9666677***************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MRSPTKHVTK TDAEAELNLP PGFRFHPTDE ELIVHYLSHK SRSMEPFASV ASPPSIIADV  60
DLYKHEPWDL PEMALFGTKE WYFFTPRDRK YPNGSRPNRV TRNGYWKATG ADKPIKSKSD  120
PKVTVGIKKA LVFYAGKGTK GIKTNWIMHE YRHPAPSKLD DWVLCRLYNK KNNPKEMIIP  180
PQDNTTSPSD ELQGEQSYSD ISGSLDSFEY SDGDYGKIYN DNFMFLGDLE PEPSTVTKDT  240
SDQRDMGLID NLMQKELEDG NNWLDGLSLE DLHHCLEAMP TSYDIYGMPM NYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-70NAC family protein