PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043778.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 123aa    MW: 13819.5 Da    PI: 5.271
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043778.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB151.81.3e-47398297
                  NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
                            e+dr+lPianv+rimk++lP  akisk+a+et+qec+sefisfvt+eas+kc++e+rkt+ngdd+ wala+lGf+d+ +++  yl+k+r
  Cse_sc043778.1_g010.1  3 DEHDRMLPIANVGRIMKQILPPTAKISKEARETMQECASEFISFVTGEASEKCHKENRKTLNGDDISWALASLGFDDHSNAVVRYLNKFR 92
                           689*************************************************************************************** PP

                  NF-YB 92 elegek 97
                           e+e+ek
  Cse_sc043778.1_g010.1 93 EFEREK 98
                           ***997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MVDEHDRMLP IANVGRIMKQ ILPPTAKISK EARETMQECA SEFISFVTGE ASEKCHKENR  60
KTLNGDDISW ALASLGFDDH SNAVVRYLNK FREFEREKVA ASSSVASKAP ASQINEDVDE  120
TFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.18e-51NF-YB family protein