PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc044314.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 175aa    MW: 19883.5 Da    PI: 9.5288
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc044314.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.98.4e-4410108199
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrrkC ++Cv+apyfp e+p+kf nvhk+FGasnv+kl++++ +++red++ssl+yeAear+rdPv+G+vg+i+ lq+q++
  Cse_sc044314.1_g010.1  10 PCAACKFLRRKCIPGCVFAPYFPPEDPQKFMNVHKIFGASNVTKLMNDVLPHQREDVVSSLAYEAEARIRDPVHGCVGIISYLQRQVD 97 
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallke 99 
                            +l+++l+++++
  Cse_sc044314.1_g010.1  98 RLQKDLDATNA 108
                            ******99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MASSTSYNYP CAACKFLRRK CIPGCVFAPY FPPEDPQKFM NVHKIFGASN VTKLMNDVLP  60
HQREDVVSSL AYEAEARIRD PVHGCVGIIS YLQRQVDRLQ KDLDATNADL LRYSSNGMTS  120
IQPVTRQRAA DHFATRRIGG GYYQPPPSYY GNRMWNLQNH SNFRGNNMTD GKQNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.29e-69LBD family protein