PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc044409.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 107aa    MW: 12347.8 Da    PI: 9.8484
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc044409.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.4e-131671146
                           TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.......TTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.......kgRtlkqcksrwqk 46
                           +g W++eEde+lv++++ +G +   +W+++++           gRt+  +k++w++
  Cse_sc044409.1_g010.1 16 KGLWSPEEDEKLVNYITTYGRHghgCWSSVPKLADghessylPGRTDRAVKNFWNS 71
                           678*****************88********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MHEGGNRFSN RQKLTKGLWS PEEDEKLVNY ITTYGRHGHG CWSSVPKLAD GHESSYLPGR  60
TDRAVKNFWN SNTKKKLLQF QLQTVNEQGR RVDAPLPLVK HDQETEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.17e-21MYB family protein