PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc044409.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 165aa    MW: 18956.2 Da    PI: 6.96
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc044409.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-131669146
                           TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.......TTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmg.......kgRtlkqcksrwqk 46
                           +g W++eEde+lv++++ +G + +W+++++           gRt+  +k++w++
  Cse_sc044409.1_g020.1 16 KGLWSPEEDEKLVNYITTYGRHgCWSSVPKLADghessylPGRTDRAVKNFWNS 69
                           678*****************98******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MHEGGNRFSN RQKLMKGLWS PEEDEKLVNY ITTYGRHGCW SSVPKLADGH ESSYLPGRTD  60
RAVKNFWNSN TKKKLLQFQL QTVNEQGRRV DAPLPLVKHD QETENEVDLH PLPPSFMKEY  120
FDPILDQNCH PNHLIKQTGS ESDSMNLITN SQPNIQSIGH NFNSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.28e-20MYB family protein