PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc044614.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 482aa MW: 53644.1 Da PI: 7.6336

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc044614.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.9	3.3e-31	162	220	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgynWrKYGqK+vk+se+prsYY+C++++Cp++kkve+s +++++ei+Y+g+Hnh+k Cse_sc044614.1_g010.1 162 LDDGYNWRKYGQKQVKSSENPRSYYKCSYQNCPMRKKVETSL-EGDITEIVYKGSHNHPK 220 59**************************************.*************85 PP
2	WRKY	103.9	9.1e-33	316	374	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC v+k+ver+++d + v++tYeg+Hnh+ Cse_sc044614.1_g010.1 316 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTSGCGVRKHVERASNDMRSVITTYEGKHNHD 374 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MSSSGISFES SSNSPPPLPP SSTATGVPKF KSIPPPSLPI SPPSFSPSSY FSFPGGLTAA 60 DLLDSPALIS SSQILPSPTT GSFPFHAFNW DNNNQIQEQS IKKLENNNFN GFQFQNHQSN 120 PPSGIYDKIL VETEYSAQKQ RIGSNYTRDH NNYNHQSAPK KLDDGYNWRK YGQKQVKSSE 180 NPRSYYKCSY QNCPMRKKVE TSLEGDITEI VYKGSHNHPK PLSNKRSASA LGSSSSFGVS 240 QMNDLQDQSN GSKQWECVGT PENSSVSIGD DEFVEDEAQA KKLKMENENE GTSVEGSRTV 300 REPRVVVQTV SDIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTTSGCGVR KHVERASNDM 360 RSVITTYEGK HNHDVPVARG MGHRQLLPSN SNNNAATMTT KPSQLSYMHS TNFMIDQTHG 420 SNLPPSSQFT LEMLHKPQGF GFSGFEDPIR SAYTNRQPNY DSVFSKAKDE PQDDNFLESF 480 LC

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MSSSGISFES SSNSPPPLPP SSTATGVPKF KSIPPPSLPI SPPSFSPSSY FSFPGGLTAA  60
DLLDSPALIS SSQILPSPTT GSFPFHAFNW DNNNQIQEQS IKKLENNNFN GFQFQNHQSN  120
PPSGIYDKIL VETEYSAQKQ RIGSNYTRDH NNYNHQSAPK KLDDGYNWRK YGQKQVKSSE  180
NPRSYYKCSY QNCPMRKKVE TSLEGDITEI VYKGSHNHPK PLSNKRSASA LGSSSSFGVS  240
QMNDLQDQSN GSKQWECVGT PENSSVSIGD DEFVEDEAQA KKLKMENENE GTSVEGSRTV  300
REPRVVVQTV SDIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTTSGCGVR KHVERASNDM  360
RSVITTYEGK HNHDVPVARG MGHRQLLPSN SNNNAATMTT KPSQLSYMHS TNFMIDQTHG  420
SNLPPSSQFT LEMLHKPQGF GFSGFEDPIR SAYTNRQPNY DSVFSKAKDE PQDDNFLESF  480
LC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	4e-96	WRKY family protein