PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc045380.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 414aa    MW: 44542.6 Da    PI: 6.5712
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc045380.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.82.8e-06363386326
                            S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                            t++C +f  +  C+ G++C F H+
  Cse_sc045380.1_g010.1 363 TKPCIYFNSSRGCRNGASCVFQHD 386
                            89*********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MRGMHSSKRV TWASDLNLCQ VKLFLSEESP SQVGVGGQDH LQAKSPWPWP SVGAGSDDNL  60
PPGFEGSQPS NPFQSKLSQV PVIQWKCPAR FVIDSTWQVA AGEESKELEV ENQREMRVLE  120
AVYPRASSIP PNPASAMGAE ESSHYNDQHT PIIPITPIED EDMAPDTSSS VTPPTTTVAS  180
HSANGMVPPV MAHGVEPDVM TAAYTALNAA MSNTTQASLI DPNLLMKILS NPTLIEQLVS  240
NHGPSTSSQP LSQPPAVSSP SPPLPVHGRP PHIPFSTATS SNGPAHYQPP NKAGSVHVPV  300
PASVSVSSLQ QQPPQEVNPR KDINYYKSLI QQHGGENPEP TNSNVINSNN NSQKTRDTKS  360
KSTKPCIYFN SSRGCRNGAS CVFQHDSSSQ QRVSSLPDTQ SAKRMKMDRE ITGT