PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc045547.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 331aa    MW: 37445.4 Da    PI: 9.8917
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc045547.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81e-172976148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +l+ +++q+G g+W++ + + g++R++k+c++rw +yl
  Cse_sc045547.1_g010.1 29 KGPWTPEEDRKLLSYIQQYGHGSWRSLPTKAGLKRCGKSCRLRWTNYL 76
                           79********************************************97 PP
2Myb_DNA-binding53.55.4e-1782126147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg ++ eE+  +++++++lG++ W+tIa++++ +Rt++++k++w+++
  Cse_sc045547.1_g010.1  82 RGTFSFEEERTIIQLHALLGNR-WSTIAAHLP-RRTDNEIKNHWNSH 126
                            899*******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MTKSLGRNDK NKKQNNNGNI LGLGIGVKKG PWTPEEDRKL LSYIQQYGHG SWRSLPTKAG  60
LKRCGKSCRL RWTNYLRPDI KRGTFSFEEE RTIIQLHALL GNRWSTIAAH LPRRTDNEIK  120
NHWNSHIKKR MTKMGIDPMT HKPKSGTQLL GTNLNHMAQW EAARLEAEAR LVQKPKNHLN  180
QLSHNHVSPQ SILDLHKTST TLPPQTLPCL DVLKVWQGNL WSNYTINNES LQSLISRPKV  240
SVATLVMPVL NNVESNGTCG QGPTLKHNDQ TETKTGPFDE FEDANDANFI NDDPLRSPEF  300
WEEFVDVLDG GWNSQTNNFA LMASPPASSV F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.19e-71MYB family protein