PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc045697.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 225aa    MW: 25527 Da    PI: 8.9181
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc045697.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.7e-1574116347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc045697.1_g020.1  74 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 116
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MWKNKEAMTT YTPSPPRCFL YNNISSHLHI SIFSKQKTMT SSSSNDDVNL LKKKWSWTPE  60
EDAKLIHPNV QHRPFTPHED DVILRAHLIH GNKWSVISKL LPGRTDNAIK NHWNSTLRRR  120
GLTPTRSSES ESNQSDDNEG LKNKRRCVSV SDVSSCDGMT VLTLLLPGNG EKKKRGDDEV  180
EKEIEDTCLV DVMKKMIAKE VRSYIDELRA KDGLSFGAVL LPVAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172199KKKRGDDEVEKEIEDTCLVDVMKKMIAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.14e-21MYB family protein