PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc045752.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 240aa    MW: 28062.1 Da    PI: 9.7081
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc045752.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.94.9e-181663148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd llv+ v+ +G g+W+++a   g++R +k+c++rw +yl
  Cse_sc045752.1_g040.1 16 KGPWTAEEDRLLVQHVNVHGEGRWNSVATLAGLKRNGKSCRLRWVNYL 63
                           79********************************************97 PP
2Myb_DNA-binding55.61.2e-1769113147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rgr T++E+ l++d+++++G++ W+tIar ++ gRt++++k++w+++
  Cse_sc045752.1_g040.1  69 RGRITPQEEALILDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113
                            89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MYYQGVMSGV EEKWRKGPWT AEEDRLLVQH VNVHGEGRWN SVATLAGLKR NGKSCRLRWV  60
NYLRPDLKRG RITPQEEALI LDLHARWGNR WSTIARSLPG RTDNEIKNYW RTHFKKRTKG  120
ASDESTKLKA RLLKRQKFQQ EQRQRLMMQQ NEADMIKVMS LLLEENENKV GHMPLAMIER  180
HQDKVYEEPQ SLINPMILLN GCYDSSYMPV TPMNEEVGLW DGLWSLDEVH GPNFCAARAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.11e-76MYB family protein